I cannot understand why none of the alarmist articles about Skype (some even by so-called "cypherpunks") has ever even bothered to run such a simple check.
FWIW, I ran my own simple test using netstat when Skype first centralized the supernodes. I walked away satisfied when I still saw primarily P2P activity during voice/video calls to an IP that belonged to the remote party. (It used UPnP port forwarding to traverse the NAT/firewall, if anybody is curious.) But then, I'm the trusting kind and dug no further. And it's been a couple years since. If there truly are "hackers" on here, I encourage them to try their own experiments and share them.