Three DBs? I don't suppose you have a blog post or something that explains your architecture decisions? Not criticising - I'm sure you had good reasons - but I'm rather curious as to what they were :)
It looks like MongoDB is being used for fetch/push history, feed icon data, and article data. It's also being used for some other stuff: https://github.com/search?l=Python&q=%22mongo.Document%2...
I suppose I could also look at the source ;)