Many such comments are very dumb, asking 'and how do you feel about viruses, screwworms, etc.?', but since you say this is a genuine question: mosquitoes are numerous and we know that they represent a source of food for many species (bats, birds, other insects). As far as I know, there is genuine debate among scientists about the role that mosquitoes play in their ecosystems. Everyone here has seen species of animals and plants eradicated and then being reintroduced or replaced, when we realise what role they were playing.
Again, assuming you're asking in good faith: you're asking why these commenters are so concerned while humanity is eradicating species all the time anyway: these are not the same populations... I'd wager there is a big overlap between those wondering about consequences and those taking action for the planet (not eating animal products, not flying, etc.). Similarly, I'd wager there's overlap between those posting such illogical retorts, and those eating animals at every meal and driving their car daily.
I see the same ridiculous retorts in HN debates about the condition of animals.