Couldn't agree more. MCP is just Tool Use and the terminal agents all have embedded tool uses like WebSearch, Bash, Grep, etc and those are just MCP by another name. CLI's called by a model are just Bash Tool usage calls. Bash tool is just the most open ended broad MCP you can expose and what you gain is less context bloat (no specialized tool descriptions, just Bash) and what you lose is control over the agent -- until you setup a rigorous set of governing permissions on the Bash Tool.

I have a fleet of sandboxed Claude Code instances running and they share files with each other. The files are stored on AWS but they don't have access to AWS at all -- they can't see the access keys. In fact they don't know the files are on AWS. Instead they have a set of MCP tools for listing/uploading/downloading from an internal, virtual filesystem with a special URI handler (ie agentfiles://somefile.json) and the outer orchestrator of the Claude Code instances takes the MCP requests and does the actual file manipulation on Claude's behalf. The LLM seems to adapt quite well to this strange, arbitrary filesystem and I get to keep these agents fully compartmentalized. And I have tool request logs and logs in the outer orchestrator for full auditing of the agents. MCP is a really natural fit for this kind of stuff.