Maybe PyPy needs a Steve Jobs-like figure to write a "no C extension" manifesto, declaring that all Python apps must be 100% Python.
CGO only exists as a matter of convenience.
If you removed JNA/JNI/CGo, plenty of people would complain…but the vast majority of uses of those languages would still work, unaltered, because most common tasks on the JVM and Go runtime don’t require external native deps.