Odd variable naming? Stylistic choices that are watermarked?
Or as someone else noted further down in the comments, it could be more subtle:
Between the first and second most likely choice, in certain positions it will consistently choose in a certain way.
Whatever it is, I'm sure it's load-bearing.
I might be imagining things of course. But comments would be great fit for this use case.
edit: as an aside - I actually use extensions to collapse comments and change the color to be less intrusive.
There isn't any effect on the quality or precision of the output. Nothing changes in practice.
If it works like people describe - on the every nth token or something - then the mark will be left in the chain of thought and discussion with the model - not in the code artifacts.