I'd generously assume this is something about the specific category of agentic task presented in the chart... but it does raise the question "then why is that category the one they chose to highlight here".
Agentic search is a different story, but even there it still dominates 4.6 (as in, for everything Sonnet 4.6 can do, Sonnet 5 can do it as well or better at the same or lower cost).
Yes, Opus 4.8 dominates Sonnet 5 over its entire range in both categories, but Opus's lower range is limited and there is a valid regime on the lower end where Sonnet 5 use makes economic sense. This is not the case for Sonnet 4.6 where Opus 4.8 dominates it completely on both charts.
Edit -- reading your response closer I think we're saying the same things, maybe just disagreeing on whether that lower end is valuable or not.