I’d be fascinated to hear more if you’re willing to share. What is special about your document model which makes existing tools like automerge a bad fit?
Worth noting, the decision to eschew CRDTs predates my time here, and I've pushed for a CRDT rewrite quite a bit since I believe it could be done. The other main concern they had was memory usage, but it seems like EG Walker would solve that. Our system uses a "Commit DAG", (an Event DAG by another name), and does a three-way merge using a common ancestor of the diverged documents, and so a lot of the bones of EG Walker are there, and I'm exploring ways in which we could gradually move to it.