Mathematicians make new discoveries by building and applying mathematical tools in new ways. It is tons of iterative work, following hunches and exploring connections. While true that LLMs can't truly "make discoveries" since they have no sense of what that would mean, they can Monte Carlo every mathematical tool at a narrow objective and see what sticks, then build on that or combine improvements.
Reading the article, that seems exactly how the discovery was made, an LLM used a "surprising connection" to go beyond the expected result. But the result has no meaning without the human intent behind the objective, human understanding to value the new pathway the AI used (more valuable than the result itself, by far) and the mathematical language (built by humans) to explore the concept.