It sounds like you think this is about hypothetical and marginal health benefits but people have very acute and immediate physical (and cognitive) issues because of disrupted gut biome that are objectively improved by cutting out, in particular, gluten. This isn't just some weird obession.
I don't think you could solve gluten intolerance but just improving your gut microbiome, so they're probably not related.
Other gluten intolerance is probably not gluten, gluten is just a close enough proxy. Could be FODMAP + IBS or maybe some other sensitivity.
We also don't really understand why things like a FODMAP diet work. It's not that feeding your gut bacteria is bad, it's actually pretty good. But for some people it's bad, and they get symptoms they attribute to gluten intolerance.
Legumes, onions, whole grain etc that are high FODMAP are good for you. Fiber is good for you, it lowers your risk of metabolic diseases and helps your digestion. But, for some people, it's bad for their digestion. That's weird.
So all that is to say that, while gut bacteria matters, it varies person to person and we can't definitely say what food is good for the microbiome and what isn't.
Seems extremely unlikely. Of someone is eliminating gluten they from their diet they usually aren't also eliminating dairy, legumes, and other high-fodmap foods; gluten-free is restrictive enough already.
The only other sensitivity I could think of in which this makes sense is wheat sensitivity (but not other gluten containing grains which are less common).
Here's a decent paper that shows an adverse effect: https://pmc.ncbi.nlm.nih.gov/articles/PMC10330715/
I understand that this is the realm of crunchy weirdos, but thinking holistically doesn't mean you need to lobotomize yourself.
Here's another paper examining some brain effects of chronic gut inflammation, which could be reasonably inferred as a potential consequence of long-term glyphosate exposure: https://pmc.ncbi.nlm.nih.gov/articles/PMC10661239/
"It impacts the gut biome" isn't a get-out-of-jail-free card for these arguments; if it were, you could knock down all sorts of things, including specific diets (and most abrupt changes in diet).
I have raised a flag. Lowering your exposure to a novel chemical agent that directly impacts a massive and poorly-understood symbiotic system within the body isn't a bad response. Glyphosate exposure certainly isn't beneficial, so I'll treat it like Pascal's wager: avoiding this has more upside than downside.
I’m pretty sure there’s hundreds of things we rightly understood are detrimental centuries before we knew how it worked. Aka pretty much everything bad before 1900.