I don't know that 'removing' these as bus-stops would actually change anything. I think a larger question is whether route changes should occur.
There was a large effort in Philly called the 'Bus Revolution' [1] that aimed to re-balance routes (I have a map from the 50s on my wall and the bus routes are the same, including numbers, as they are today). The problem there was that there was a funding crisis that massively delayed the implementation [2]. These services are massively under-funded, and that's the primary issue; implementing the article's suggestions are not free.
[1] https://wwww.septa.org/initiatives/bus/ [2] https://www.nbcphiladelphia.com/news/transportation-and-tran...