This is my first post on HN (waved reddit good bye today).
The problem is not religious arguments - the problem is ranting and not reasoned debates (recently Reddit's Palestinian / Atheism / GOP bashing / Obama posts became intolerable).
This discussion seems civil and well thought out. A good example is dominik's post above – it is pretty well reasoned and factual post and is non-inflammatory it is a good post (even though I am not Catholic).
It is not the nature of the argument that destroyed Reddit it is the way in which it was done. And this can happen with any topic not just Religion.