I use duplicity http://duplicity.nongnu.org/ in conjunction with S3 (and possibly Glacier soon) to store encrypted backups. the data's in "the cloud" but is encrypted.
I tried to use Duplicity a few times with WebDAV (for box.com), and it kept freezing, becoming unable to resume the transfer, unable to see that I have files on the share even when I managed to upload all the files with the desktop client, and various other bugs. It's not as robust as I'd like, sadly.