NodeJS, Ruby, etc also have this problem, as does Go with CGO. So the problem is the binary dependencies with C/C++ code and make, configure, autotools, etc... The whole C/C++ compilation story is such a mess that almost 5 decades ago inventing containers was pretty much the only sane way of tackling it.

Java at least uses binary dependencies very rarely, and they usually have the decency of bundling the compiled dependencies... But it seems Java and Go just saw the writing on the wall and mostly just reimplement everything. I did have problems with the Snappy compression in the Kafka libraries, though, for instance .