> When you connect through SSH you don't have GUI and that's not a reason for avoiding using GUI tools, for example.

One major difference can emerge from the fact that using a tool regularly inevitably builds muscle memory.

You’re accustomed to a replacement command-line tool? Then your muscle memory will punish you hard when you’re logged into an SSH session on another machine because you’re going to try running your replacement tool eventually.

You’re used to a GUI tool? Will likely bite you much less in that scenario.