That comes with other problems.
Transit gates have the big advantage of providing you with instant feedback on whether your ticket or mode of payment is valid or not.
I've seen tourists get in trouble with ticket inspectors at least once in a very unpleasant way for simply having pressed the wrong button at an inscrutable ticket vending machine.
> I don't understand -- we are talking about 100ms or so of latency? which is almost completely dwarfed by any mechanical action such as the gates actually opening??
As others have already said, Japanese gates are open by default, and are more of a user interface indicator (to you and potentially station attendants nearby) than an actual physical barrier. You could step over or between the "barrier" that extends when the gate rejects your payment pretty easily in most, but it would be very obvious that you're skipping the fare.