This is particularly common with CLI tools written in some languages. I was looking at Antora the other day (not intending to single this project out, it's just the one that came to mind). I found two ways to run it:
1. By installing Node: https://docs.antora.org/antora/latest/install-and-run-quicks...
2. By running it in a Docker container: https://docs.antora.org/antora/latest/antora-container/.
The amount of complexity here is shocking. This is a tool that could just as well be a single binary, with the only dynamic linkage being to libc and maybe OpenSSL.
This also means that if something goes wrong, black-box debugging tools like system call tracers are much harder to use. I rely on system call tracers all the time, and it really sucks when they stop working.
Imagine, like, your source control tool being shipped as a Docker container.
Don't get me wrong, I absolutely would love for everything to just be statically linked and packaged in a single binary (an approach that works great on windows usually). And you are right that "over using" docker is kind of a trend, but I think it's due to a problem (packaging apps in Linux) rather than being a problem by itself.