If you were not referring to extinct branches I don't know why you thought "they would likely represent two clusters" if they did not already in the clustering given.
> Afro-American people have the biggest genetic diversity in America and their genetic subgroups are so distinctive that they require separate testing in clinical studies.
Yes, and?
> I bet you won’t be able to tell the difference between them from their appearance though.
Maybe, and?
> Now good luck redefining the concept of race with this knowledge.
Good luck trying to deny biological race when you've just listed more evidence for it.