I agree that the scientific method is the best approach towards finding objective truth (which is of course precisely what it is designed to do). The problem is placing objective truth above all other truths. It annihilates subjectivity, which is possibly the most crucial element of being human. And of course formal science has limitations on the truths that it can reveal in its own system (the uncertainty principle) and on a practical level every known scientific theory, no matter how successful, breaks down at some level (see quantum gravity).
All of which is to say that my stance is: embrace science but accept its limitations.