Each layer dilutes democratic input and accountability. By the time you reach EU law, the average voter's influence is homeopathic at best.
Localists would argue since a federation is highly non-local it shouldn't even be attempted because it leads inherently to non-representative centralisation of power.
This multi-layered separation explains why EU citizens feel disconnected from Brussels decision-making. It's a game of democratic telephone where the message gets garbled with each step and the centralist power machine inserts its own interests.