Evidence points to Wuhan market as source of Covid-19 outbreak
newscientist.com
newscientist.com
My favorite quote from the article: Fourth, for the first time it made me see the coronavirus as one of God’s biggest and funniest jokes. Think about it. Either a zoonotic virus crossed over to humans fifteen miles from the biggest coronavirus laboratory in the Eastern Hemisphere. Or a lab leak virus first rose to public attention right near a raccoon-dog stall in a wet market. Either way is one of the century’s biggest coincidences, designed by some cosmic joker who wanted to keep the debate stayed acrimonious for years to come
EDIT: And since my comment is downvoted, here's a reference from Dr. Shi herself:
> We have done bat virus surveillance in Hubei Province for many years, but have not found that bats in Wuhan or even the wider Hubei Province carry any coronaviruses that are closely related to SARS-CoV-2. I don't think the spillover from bats to humans occurred in Wuhan or in Hubei Province.
https://web.archive.org/web/20210727042832/https://www.scien...
No one expected natural spillover near Wuhan. That doesn't mean it didn't happen, but the claim that the WIV was situated based on that is unequivocally false.
A laboratory (and nearby university) that was carrying out risky gain of function experiments with US funding, as finally admitted to in recent congressional hearings.
This feature is the lead evidence for a lab leak.
"Furin cleavage sites naturally occur in coronaviruses" - https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836551/
Just one paper among many, not sure it's as strong evidence as you seem to think.
Overall, current evidence seems to be mostly be pointing to a natural origin, maybe linked to wildlife sold in Wuhan.
Wonder when we'll reach any sort of conclusion to this.
The text below is from an article posted elsewhere on this page (which is obviously biased).
"All you really need to know about furin cleavage sites is that SARS-CoV-2 is the first and only SARS-like virus, out of many hundreds that have been described, ever to show up with a furin cleavage site in its spike gene. Sure enough, it’s an insertion, not a mutation, and it’s at the S1/S2 junction."
https://www.spiked-online.com/2024/09/10/there-is-now-no-dou...
No, I can’t accept that.
He seeks to persuade with bombast:
All you really need to know about furin cleavage sites is that SARS-CoV-2 is the first and only SARS-like virus, out of many hundreds that have been described, ever to show up with a furin cleavage site in its spike gene. Sure enough, it’s an insertion, not a mutation, and it’s at the S1/S2 junction.
and ignores dull studies: *Furin cleavage sites naturally occur in coronaviruses*
The spike protein is a focused target of COVID-19, a pandemic caused by SARS-CoV-2. A 12-nt insertion at S1/S2 in the spike coding sequence yields a furin cleavage site, which raised controversy views on origin of the virus. Here we analyzed the phylogenetic relationships of coronavirus spike proteins and mapped furin recognition motif on the tree. Furin cleavage sites occurred independently for multiple times in the evolution of the coronavirus family, supporting the natural occurring hypothesis of SARS-CoV-2.
~ https://www.sciencedirect.com/science/article/pii/S187350612...Like many people he has studied science. As the twig was bent so he bends his view of science towards a pro fracking, Euroskeptic, Conservative House of Lords, investment banker PoV.
> Even if WIV did try to create COVID, they couldn’t have. As Yuri said, COVID looks like BANAL-52 plus a furin cleavage site. But WIV didn’t have BANAL-52. It wasn’t discovered until after the COVID pandemic started, when scientists scoured the area for potential COVID relatives. WIV had a more distant COVID relative, RATG-13. But you can’t create COVID from RATG-13; they’re too different. You would need BANAL-52, or some as-yet-undiscovered extremely close relative. WIV had neither.
> Are we sure they had neither? Yes. Remember, WIV’s whole job was looking for new coronaviruses. They published lists of which ones they had found pretty regularly. They published their last list in mid-2019, just a few months before the pandemic. Although lab leak proponents claimed these lists showed weird discrepancies, this was just their inability to keep names consistent, and all the lists showed basically the same viruses (plus a few extra on the later ones, as they kept discovering more). The lists didn’t include BANAL-52 or any other suitable COVID relatives - only RATG-13, which isn’t close enough to work.
> Could they have been keeping their discovery of BANAL-52 secret? No. Pre-pandemic, there was nothing interesting about it; our understanding of virology wasn’t good enough to point this out as a potential pandemic candidate. WIV did its gain-of-function research openly and proudly (before the pandemic, gain-of-function wasn’t as unpopular as it is now) so it’s not like they wanted to keep it secret because they might gain-of-function it later. Their lists very clearly showed they had no virus they could create COVID from, and they had no reason to hide it if they did.
> COVID’s furin cleavage site is admittedly unusual. But it’s unusual in a way that looks natural rather than man-made. Labs don’t usually add furin cleavage sites through nucleotide insertions (they usually mutate what’s already there). On the other hand, viruses get weird insertions of 12+ nucleotides in nature. For example, HKU1 is another emergent Chinese coronavirus that caused a small outbreak of pneumonia in 2004. It had a 15 nucleotide insertion right next to its furin cleavage site. Later strains of COVID got further 12 - 15 nucleotide insertions. Plenty of flus have 12 to 15 nucleotide insertions compared to other earlier flu strains.
Peter goes further into it in the link. Those interested can dig in further.
[1]=https://www.astralcodexten.com/p/practically-a-book-review-r...
Perhaps the answer is that both events happened - the furin cleavage escaped the lab on a precursor, which found BANAL-52 in the market.
https://pubmed.ncbi.nlm.nih.gov/36865340/
That merbecovirus is unrelated to SARS-CoV-2; but with unequivocal evidence that the WIV had at least one unpublished virus, it's hard to reject the possibility they had two.
I’m hardly qualified to evaluate the evidence for either argument but it seems that it’s hardly a clear cut case of engineering.
[1] https://www.thelancet.com/journals/lanmic/article/PIIS2666-5...
In that proposal, the WIV would have worked only on collection of novel viruses from nature, with genetic engineering at Baric's lab at UNC. DARPA also declined to fund that proposal, on safety grounds. The Times reported an intelligence leak stating the work continued with other funders at the WIV only, though I haven't seen confirmation beyond that one article.
> The investigators spoke to two researchers working at a US laboratory who were collaborating with the Wuhan institute at the time of the outbreak. They said the Wuhan scientists had inserted furin cleavage sites into viruses in 2019 in exactly the way proposed in Daszak’s failed funding application to Darpa.
https://www.thetimes.com/uk/article/inside-wuhan-lab-covid-p...
As for previous attempts from the same authors (e.g. Pekar's "The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2"), it starts with low-quality data from the early pandemic, does some complicated math, and concludes that the pandemic originated from zoonotic transmission in the Wuhan market, "beyond reasonable doubt". It therefore wasn't a research accident, and there is no need for increased regulation of high-risk research of the type performed at the WIV.
The details can and should be criticized, and I linked a detailed rebuttal in the other post. But fundamentally, how could any model reach any conclusion with the confidence they express? Western authorities had prior warning, much more advanced surveillance, and good knowledge of where the virus might get introduced (by necessity, an airport or seaport)--and yet they succeeded in tracing almost zero cases back to their introduction. So how could anyone possibly believe that a much cruder set of tools has succeeded at the more difficult task of determining the pandemic's earliest origins?
>Using data made available by the Chinese government...
They even kind of acknowledge this in the final line of the paper
> Finally, the publicly available genomic and epidemiological data from the start of the COVID-19 pandemic remain incomplete, and future data from this time could shed further light on hypotheses regarding its emergence
But there were cases in late summer 2019, and indirect evidence some researchers may have got sick around that time. They should just give up trying to whitewash it by now, nearly all the circumstantial evidence points to a lab leak, and virtually none to zoonotic origin, other than 'this is how it usually works', and 'evidence is consistent with' (ie does not rule it out).
Would love to see completely independent analysis before trusting such a large codebase is bug-free.
> He was an honorary visiting professor at Fudan University in Shanghai, China, from 2019-2021
Real good timing on his part.