You're in a lot more danger of GI infection from fresh produce as in the Chipotle condiments than you are from highly processed, standardized, frozen & reheated fast food.

I'm with you but it's a common enough sentiment that there's probably something to it, and I recall friends having issues over the years. For these people at best it's painful gas and at worst is [worse], so there is a large group of people who can't digest a particular common Taco Bell ingredient well.

I've seen speculation about undiagnosed lactose intolerance but frankly Taco Bell doesn't use that much cheese on their cheesiest items compared to say, a pizza, which is another very common food in the US and has way more cheese.