I was looking at my old 3DS photos just recently, and there's not much software to read MPO files, so this project looks pretty darn cool and I'll be checking it out.
Something that I'm sure some people aren't aware of is that the 3DS's 640x480 photos don't match the resolution or aspect ratio of the 15:9 400x240 (800x240, but halved horizontally for 3D) screen, so the 3DS photo gallery actually shows photos zoomed in by default. If you didn't know this, now you can revisit your 3DS photos and see extra photo for free by pulling down on the circle pad.
Edit: I should mention - I did say that there's not much software that reads MPO files, but one program that does is StereoPhoto Maker. https://stereo.jpn.org/eng/stphmkr/index.html I haven't tried it out yet, but it supports aligning and batch-processing 3D images, among other features.