Tree roots also greatly reduce erosion, which means that rainfall is more likely to end up in a few well-established waterways and less likely to be spread across numerous tiny rivulets; it also means that waterways are less likely to change shape over time. Large, stable waterways are much easier to collect water from (e.g., via dammed reservoirs) than small or unstable waterways.
However, I'm not sure how much of a factor erosion is here. I suspect it will only directly impact small communities that rely on minor waterways for drinking water. (Mind you, when small communities connect up to city water because their existing water supply becomes unreliable, that can affect the city's water supply.)