That's the real trick and problem - by the way
https://www.amtraktrains.com is a great forum if researching - you CANNOT use averages for 'one time' trips.
If you're talking about your commuter to work, you can use averages to get "good enough" because you take it often enough that the averages will mostly work.
But these long distance trains might on average be two hours late - but if they're 24+ hours late, you might have ruined everything (unless the connection was another Amtrak train, then they will work with you).
For those types of trips, if you want to take them, treat them as land cruises and either be on one train to your destination OR plan to have a mini vacation at each connection, staying a day or two and seeing the sites.
(I have had two long distance trains die on the rails and become busses, which is amusing if you're not in a rush. Seven charter busses descending on a Subway in some infinitely small town for dinner amusing. They had everyone get off the train onto busses, we drove to where the train that was coming the other way was, and got on it, because the rails were blocked by a corn train flipping over.)