As a point of comparison, the total amount of nickel in the Earth's oceans is approximately 1 billion tons.
Let's examine a reductio ad absurdum of a medium term future where we have 1000x more space vehicles all taking space dumps into the atmosphere. Would that be best practice? Is there a better norm we could establish today?
This isn't a theoretical question. There's growing awareness among researchers that there's a need to research how the gasses and particles produced by rocket launches at scale could have an impact on the atmosphere.
https://newsinteractives.cbc.ca/features/2023/rocket-polluti...
So, there's about 1/2 a ton of nickel falling into the atmosphere every day anyway, 180 tons a year, already in the ballpark of your thousand ships.