One sentence with unfortunately chosen words shouldn't invalidate the - in my view largely reasonable - arguments of the whole text.
DJB also explains needs for hybrids as follows: we don't yet have any post-quantum algorithm that we can confidently use as a direct substitute for well-established classical algorithms. So for now we need to consider possibilities for QC becoming real and PQ algorithms broken, hence hybrids.
> "hybrid solutions make implementations even more complex".
> If the words are taken purely at face value then they're clearly correct
The argument here is that the complexity is mostly due to the adding of new algorithm, not the hybridization. It goes on to argue that the added complexity due to the hybridization itself is negligible, especially considering the level of security provided.
In both cases the work is in adding and testing the new thing.
Whether you comment out or not the old thing does not really change the amount of programmer work and the execution time and required resources are also not affected significantly in this case.