You send a recovery vehicle down the line to fetch it, capable of hooking it, and strong enough to tow/ drag it to an exit point or service "vault" just like "vaults" on underground tunnels for power, data, gas, etc. The tow vehicle basically just needs to weigh enough.
Or you send a human down the line on a platform with wheels. The tunnel would have to be at least as high as those crates and at least twice as wide.
There are far bigger challenges here, like the absolutely massive cost of digging / boring the tunnel and trying to amortize that over what you're delivering. You have to move a fuckton of Big Macs to have this make financial sense, and your competitors include "a guy on an electric bike making tips who uses a few KWhr of electricity over an 8-10 hour shift."
It's really hard to compete against massively subsidized public infrastructure (roads and ICE vehicles) when you're not subsidized at all.