"opt-in by default" kinda makes sense as a combination of words, but you're right that people just usually call it "opt-out" (and vice versa)
So "opt-in by default" doesn't make any sense.
However, I do see this opposite usage increasingly often, which means "opt-in" shouldn't be used any more.
Using "on by default", "enabled by default", "off by default", "disabled by default" would be clear and make sense.
Like a pre-checked box on a form about your desire to receive marketing mails.