There’s a tradeoff[1] throughout mathematics, not unlike the expressiveness—analyzability one in programming languages: either the
set of things you’re working with has nice properties (e.g., for the reals, completeness) and supports nice constructions with no caveats (e.g., for the reals, limits); or each of the
things in the set is individually nice and tractable (e.g. computable).
There isn’t a single universally appropriate choice here, and sometimes even the direction of the axis is not obvious (real numbers lack solutions for algebraic equations; complex numbers lack smooth functions nonzero only in a finite region), but usually a simple family of eldritch objects is easier to deal with than an byzantine clan of cuddly objects.
Could you do simple physics and more generally ordinary differential equations over the computable numbers? You probably could to some extent, but it’s unlikely you’d get the nice intuitive geometry you get over the reals (see e.g. Arnold’s ODE textbook). The (basic) geometry of surfaces parametrized by real coordinates is fairly straightforward (differential geometry); the geometry of surfaces parametrized by rational coordinates is famously mind-blowingly abstract (algebraic geometry). The (basic) theory of real or complex functions is mostly understandable (analysis); the theory of natural or rational functions is horrifying (number theory).
Also, as a sibling reply mentions, it’s not like computable numbers will solve every problem: even though arithmetic over them is decidable, order still isn’t, and computable transcendental functions aren’t exactly a cakewalk either.
It doesn’t mean the computable reals aren’t worth knowing about, but, well, we live in a world where mandatory education has violently rejected[2] every advance in mathematical thought since Otto von Bismarck left office, and reduced the ones it accepted to a desiccated husk[3], so there are a great many things in that category. (I cannot help but remember the SMBC patriotism vs nationalism comic[4]: “Now I am mathematics.”)
[1] https://ncatlab.org/nlab/show/dichotomy+between+nice+objects...
[2] http://www.ams.org/notices/201201/rtx120100031p.pdf
[3] https://www.maa.org/external_archive/devlin/devlin_03_08.htm...
[4] https://www.smbc-comics.com/comic/an-important-distinction