The only reason their values might seem to make any sense is if you have this weird idea that you should support at least five or six levels of headings. You actively shouldn’t.
Take the scale of 1.250 (the default of this tool). −1 is riskily small for any purpose, and −2 should never be used. +1 isn’t big enough for any kind of heading. +2 to +4 are reasonable heading sizes, but aren’t different enough from each other. +5 might be OK as a title, but very often you’ll want to go bigger. Depending on content, it might do for a heading style too.
Another mildly popular value: φ, 1.618. −1 is already too small for any purpose. +1 is decent for a subheading level, and +2 for a heading, and +3 for a title. (+3 is normally too big for any sort of heading; +4 could also be reasonable for a title.) But at that point you have only about four usable values, and where was the virtue in using a scale for them? You could have chosen more suitable values manually.