Graduate Project Help: What sections do you include in your paper?

Problem: I need to write 35+ pages minimum for a Software Engineering Graduate project. Professor says use any format we want ( Intro – Conclusion –References) When you write project papers what sections do you usually include?

Background: I am a student that is working on his graduate project that ties into my day job. Basically, when I was an intern I wrote an internal Employee/Role Management System in Flash Forms with a ColdFusion/MSSQL backend. Now, for the project I am making a mobile app with jQuery Mobile so that this web application can be accessed via mobile devices, which is why I choose jQuery Mobile.

Value Provided: * Accessed on majority mobile devices. Can even be accessed via browser, could replace current web app

* More user friendly UI, in current web app functionality is all over the place in different navigation tabs

* First initiative with mobile apps. This is paving the way for more web apps to be converted to mobile app development I am sure there is a lot of experience here. Thanks all!