If it were to get technical enough to differentiate between rhumb and great circle, then maybe it should factor in elevation changes too.
Reading total elevation gain/loss from his graph it hard but 3000m up and down seems about right.
Great video on this from Matt Parker (focusing on area in this case): https://youtu.be/PtKhbbcc1Rc
Edit: My point here is that if you try to plot a literal straight line through 3D space, it will be necessary to allow some amount of deviation in one axis. Else your longest 3D line will be the distance between your first two points.