No, it would mean not attributing innate value to maleness or femaleness, so to speak,, but to the relevant metrics.
One can still compute a mean afterward and potentially find that it differs, but that is no judgment of inherent value / not a causative factor for the value judgment being made.
And even then, there might sometimes be benefit to treating people more equally than they are on some metrics. Maximizing efficiency often means sacrificing resiliency, after all.