The main thing to realise is that sin and cos are not fundamentally tools for doing geometry. The fact that you can use them for working out side lengths of triangles or converting polar to cartesian coordinates is somewhat incidental.
It doesn't help that at school our first look at sin and cos is all about adjacent sides and opposite sides in right-angled triangles. It's understandable, because jumping straight into the deep end would be too hard, but it's a bit misleading.
In most mathematical applications, the x in "sin(x)" doesn't even represent an angle, so it doesn't make sense to talk about whether sin and cos are "in degrees or in radians". They're simply functions that crop up as solutions to the differential equation that describes harmonic oscillation; or the imaginary and real parts of e^ix; or exponentiation of certain matrices; or a whole load of other stuff I haven't thought of.
In all those settings, it turns out that sin has zeroes at integer multiples of pi, which forces the convention that a half-turn is an angle of pi, and the definition of radians follows from there. But as I said, for the specific case of basic trig, carrying around a scaling factor and doing everything in degrees is easy enough. Carrying that same scaling factor around in pretty much any other application of sin, cos and related functions would be hell.