Depending on the respective values of hardware, OS, and vendor support, you may very well find that this is the case.
I could regale you with stories of how a large server vendor, name rhymes with "Hell", refuses to support a class of its iSCSI storage devices on its own hardware if you're not running, say, a specific Linux distribution, rhymes with "R-HEL", and will give you rather nasty time if you try to, say, get support based on a near-identical community enterprise operating system based on the same sources.
The reasons probably boil down to marketing affiliations between "Hell Computers" and "Dead Rat", but (especially in light of prevarication on the part of Hell's salesforce regarding support) it doesn't make for a particularly rewarding support story.
The further truth is that Hell hath relatively little competence in OS-level support, and will simply hand you off to R-HEL's own techs if you go past a level1/2 script. But Hell won't actually come out and tell you this.
Point being: warranty / support is effectively voided based on OS choice. Despite vendor supporting the same OS on other products / in other contexts. And in fact using that OS for several of their own support services/products/offerings.