The plugin is potentially a derivative work of both Yosys and GHDL, but that's fine - it's possible to comply with the requirements of both the MIT license and the GPLv2 at the same time. The resulting work is GPLv2-licensed. (To be precise, you also need to preserve any copyright notices from the MIT-licensed project and the text of the MIT license. The MIT license has only one condition, but you do need to follow it, same as if you were building proprietary software with an MIT-licensed component.) If anyone distributes Yosys with the plugin, the combined work must also be distributed under GPLv2, which is also fine.
In this case, perf is (like the Linux kernel, in whose git tree it lives) GPLv2-only, and modern versions of libbfd are GPLv3-or-later, and it's not possible to comply with both at the same time. The GPLv2 has a "no additional restrictions" clause, and the GPLv3 asks for things the GPLv2 does not. So a distributor of a combined system including perf built against libbfd (like a Linux distro) cannot comply with the licenses.
(I suppose perf was written against the libbfd API back when libbfd was GPLv2, avoiding the question of whether perf is an illegal derivative work of libbfd. Or the backtracing API is de minimis, which means the source is fine but a compiled binary as par of a distro that also includes a modern libbfd is not.)
One possible answer here is to ask the perf authors to relicense under GPLv2 or later. Many years ago, at a startup that no longer exists, I wanted to reuse code from the Linux kernel "dm-verity" module in GRUB, which had moved to GPLv3, and I got a pretty quick answer from Red Hat (who was the only copyright holder for those files) saying that would be fine.