I submit that adding "In case you just said gnuplot is part of GNU,” in front of it is not too long, and far less præsumptive.
Maybe you are far too pre-assumtpive that there was any ill effect, or even ill intent, in the statement being made, especially if the same fact is accounted for in gnuplot FAQ.
I guess "GNU, but gnuplot is not GNU" could be one, but perhaps at that hectic moment RMS didn't consider that option!
No longer than, say, adding GNU/to the front of GNU/Linux.