It's not even about which frequency is dominant. I'm not an expert on psychoacoustics from the "sciency" side, but basically our brains can figure out the fundamental note based on the harmonics alone, even if we don't hear the fundamental frequency itself. De-emphasizing the fundamental frequency is sometimes used in synthesis just to create an interesting sound, but most notably this phenomenon is heavily relied on in modern heavy bass electronic music and down-tuned metal. A really common trick is to distort the bass track, so it can be still heard even if speakers can't reproduce that frequency, as distortion generates more harmonics. I don't mean distortion in literal sense, but in audio effect sense, so effects like saturation, overdrive, fuzz, clipping, etc.