The article, though, doesn't mention that the arc trajectory of ballistic missiles means they are spotted faster: https://www.economist.com/sites/default/files/images/print-e...
But such missiles are nowadays - as far as I know - primarily detected via infrared from space and not radar stations near the target which turns the atmospheric trajectory into a disadvantage due to heating of the vehicle which is also mentioned in this article.
Cruise missiles are already extremely hard to defend against, in as much as doing so requires the defender to identify all nearby ships, submarines, airplanes and other covert launch points. (ECM is not good enough, SAM also has no chance. Cannons and interceptors have low chance of spotting these as well.) Hypersonic version does not bring all that much to the table there, if anything.
He isn't. He's saying the drag creates a large heat signature which makes them vulnerable to existing detection techniques.