If we see the Native Americans as murdering rapists, how likely are we to give them restitution for the massacres we've inflicted upon them, or begin to provide them social support? And if you don't currently see them as such, how will fiction that impresses on the greater public of its veracity that it isn't so, and that the general impression of their culture is completely fabricated?
Fiction definitely shapes our society and our understanding, and if fiction as popular as this one claims to be realistic there is a responsibility to either confirm or counter it. Yes, storytelling is more important than accuracy, but when you claim the latter you had better prove it.
This argument is bad because it means well-meaning historians feel they need to whitewash the history of Indian tribes as noble savages, just to get the reaction they want today.
Star Wars is "supposed" to be ancient history within the fiction of its own story. George Lucas doesn't think it actually is ancient history.
Contrast this with George Martin's assertion that the Dothraki are "an amalgam of steppe and plains cultures [...] seasoned with a dash of pure fantasy" (or that the sexual violence in his books mirrors that of the real medieval history). This is an "out of fictional universe" argument, different from Star War's fictional conceit that it takes place "a long time ago, in a galaxy far, far away".
Star Wars is quite a clever setting because it's both vague and incredibly distant, which allows the film makers huge latitude to include tropes from cowboy, ronin, WW2 films etc without the worry of historical inaccuracy.