There could certainly be a logical error in play here, but considering this is mRNA, and not DNA, it seems like it would be fairly amazing for it to spontaneously form into DNA. Similar to a load of parts spontaneously forming into a bicycle.
That's not to say it isn't possible, but many things are possible but sufficiently unlikely that we take those risks. We eat, drink, and breathe many things every day that we don't fully understand the ingredients or impacts of.