Never once has the Linux boot manager/loader (either the original GRUB or rEFInd) been broken, by a Windows update or otherwise.
Windows of course has been well documented to happily overwrite any MBR bootloaders when you install it, but even that doesn't happen in a UEFI environment. Windows, rEFInd, GRUB, and whatever else you may have installed all have their own folders. It might change the default, but restoring your own choice is literally a matter of copying a single file.
EFI has plenty of problems of its own, but this is one it solved pretty well.
The workaround for me was the "boot from file" boot option, where I would be able to walk the directories in the efi partition and start grub. Once this was done, it was back in the boot option list.
I've had it nuke my bootloader a few times when I used to sill dualboot (now full Linux).
One time the windows installer confused the encrypted LVM disk with a corrupted NTFS partition (because it had an NTFS partition on it at some point and underlying data wasn't wiped properly) and tried to fix it. Suffice to say, that required a back restore, so now all my encrypted disks have a 100MiB NTFS buffer partition for Windows repair to fuck around it (until I removed dualboot, I occassionally found remnants of an attempted repair in them)