I don't think we have any intuition about this at all, we are however fairly accustomed to this idea with old creation myths that still loudly resonates throughout culture, and of course now that it has been the scientific orthodoxy for 50 years or so.
But yeah I definitly agree with you on the "curve fit" thing. I would not be surprised that, if one day we do find a comprehensive theory of everything (assuming this is even possible or even have a meaning at all), it would be possible to express it in this very general framework of hyper-graph re-writing itself according to some rule. That doesn't mean it's a good idea to so.
And in any case, at the end of the day, like everything else humans do, science is a social process. The goal is to get closer to truth (whatever that means), but you won't get there by ignoring any input, and insist that everyone should drop whatever they are doing and come admire/help you on your work.