Coronavirus outbreak likely now ‘gathering steam’
news.harvard.edu
news.harvard.edu
https://towardsdatascience.com/modelling-the-coronavirus-epi...
I think that reached this point is obvious that in our hyperconnected cities a containment is going to be very difficult if the R0 is 3+ and we don't shutdown commuting
PS: for those interested in real-time info from experts I recommended following:
https://twitter.com/DrEricDing
https://twitter.com/MackayIM
https://twitter.com/trvrbI'd suggest, in place, Maia Majumder (@maiamajumder) and Tara Smith (@aetiology).
First, note that Eric Feigl-Ding is a nutritional epidemiologist, not an infectious disease epidemiologist. Infectious diseases are weird for a lot of reasons, and require something of a different skillset.
For example, in a Tweet of his he has now deleted: "never seen an actual virality coefficient outside of Twitter in my entire career." about the estimate for R0 for this novel coronavirus.
Similar R0 estimates existed for SARS, and MERS. Measles, Rubella and a number of other diseases have vastly higher R0s.
He also messed up some things like conflating R0 with secondary attack rates, and was generally very sensationalistic. Basically, the things that boosted him to prominence in this epidemic built on fairly sloppy reasoning from someone outside the field.
He's calmed down now, but one might as well go to sources for people who are both good at science communication and actual outbreak scientists.
All experts have a common trait, they espouse their virtues when they are right and slink into the shadows when they are wrong, sometimes, if they have the audacity they wait for the next opportunity before popping up like a jack in a box.
For those not aware of the drama, he suggested that the virus was mixed with HIV and invented by ... ;-) He removed the tweets after that. We all know it' a touchy topic.
https://twitter.com/DrEricDing
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There have been several research about seasonal influenza and how it correlates with weather, like temperature but especially humidity
https://journals.plos.org/plosbiology/article?id=10.1371/jou...
https://www.sciencedirect.com/science/article/abs/pii/S01634...
And for the record, as of a little over a week ago, there were only a dozen cases in Singapore according to the WHO. Even if they were mutually exclusive, Singapore isn't exactly the best example.
https://www.who.int/docs/default-source/coronaviruse/situati...
Air conditioning is actually very conducive to colds and the like. When you go from outside to inside you're usually sweaty and the air conditioning tends to make you too cold until you dry out. I've caught way more sniffles in the tropics than in the freezing climates.
On a tangent, I'd love to see a graph of illnesses during summer before / after the widespread adoption of AC.
https://www.the74million.org/article/exclusive-too-hot-to-le...
Even those that do have A/C don't cancel class when it breaks.
https://www.floridatoday.com/story/news/education/2019/09/11...
The real takeaway from the 74 Million piece is that information about HVAC in American schools is difficult to come by. It would certainly be interesting to look at COVID-19 in schools vis-a-vis A/C, but good luck prying information from the school districts about either infections or air conditioning. Perhaps it would be easier in a tropical country like SG where A/C is more of a necessity than a luxury.
- Right now, there's some ongoing research about R0 relative to humidity, and it's not promising. This includes Singapore, but it should also be noted that Singapore has an amazing public health system that will confound using it as an example in both directions.
- Having written a review on the seasonality of influenza, the fact of the matter is we have very little notion of why it's seasonal, and a lot of "just so" stories.
Is one of the theories lack of Vitamin D?
A few years ago (circa 2010 or so) when I was seriously working on epidemic modeling, we tried to look for an effective seasonality model, based on temperature, humidity, etc that worked globally and failed miserably. What seemed to work in one country or area failed completely in others, and vice versa. I'm curious to see if things have improved since then
But the name has now stuck.
Any more than the fact that "people" call things stomach flu when they're not at all influenza related changes that things are called "norovirus" and "rotavirus".
References to SARS in Hong Kong news were often accompanied with references with 2003, the year of the outbreak.
Also COVID-19 is neutral, so it doesn't generate negative bias like the Spanish Flu. (Which didn't originate in Spain.)
> "The common cold is a viral infection of the upper respiratory tract. The most commonly implicated virus is a rhinovirus (30–80%), a type of picornavirus with 99 known serotypes. Other commonly implicated viruses include human coronavirus (≈ 15%), influenza viruses (10–15%), adenoviruses (5%)..." [1]
Someone you know probably has a coronavirus right now -- just not the one in the news.
But somehow this basic fact has barely been mentioned in the media.
Seriously, calling the new disease "coronavirus" is as silly as a chef calling their new very specific recipe "soup". Like... you've gotta come up with something more specific...
I’m not sure if there’s a difference between calling it Ncov-2019 or COVID-2019 :/
It's unclear, that makes it bad.
Edit: seems all I can find from WHO is 14 days, the 24 day estimate was from this paper: https://www.medrxiv.org/content/10.1101/2020.02.06.20020974v... (thanks to u/pmorici below)
> CDC believes at this time that symptoms of 2019-nCoV may appear in as few as 2 days or as long as 14 after exposure. This is based on what has been seen previously as the incubation period of MERS viruses.
From the WHO Q&A page,
> Current estimates of the incubation period range from 1-12.5 days with median estimates of 5-6 days. These estimates will be refined as more data become available. Based on information from other coronavirus diseases, such as MERS and SARS, the incubation period of 2019-nCoV could be up to 14 days. WHO recommends that the follow-up of contacts of confirmed cases is 14 days.
There was a paper that talked about 24 days but that was a single patient and the more likely scenario is that the person was wrong about the timing or got infected at a later time period.
https://www.medrxiv.org/content/10.1101/2020.02.06.20020974v...
> The median incubation period was 3.0 days (range, 0 to 24.0 days)
Sounds like fear mongering to me.
And by no testing, I meant the lack of PCR/RT-PCR assays. Which is specifically mentioned in the video around 1:20.
Edit: WHO lab test guidelines if you're curious: https://www.who.int/emergencies/diseases/novel-coronavirus-2...
Japan let some of their repatriates loose without quarantine because they had "important reasons". They went home, and while invited to stay home, who knows what they did in the two weeks since... Today it was announced that one of them was now positive for 2019-nCoV.
One of the quarantine workers on the Diamond Princess (the cruise ship stuck in quarantine in Yokohama) was found positive. Now they have to track his family too.
That seems like the only way to get some clarity on this.
> GAZETTE: Is that the most concerning new information, that it might be transmissible before symptoms are apparent? That would seem to make this a lot trickier.
> LIPSITCH: Yes. I think that’s the most concerning piece, but the evidence for that so far in the public domain is pretty limited. I’ve seen hints that aren’t published yet, but the evidence for that that’s been peer reviewed is quite limited.
One of the first symptoms of this coronavirus is a dry cough. These people would not be considered asymptomatic in the technical sense because clearly they have a symptom.
However a cough is such a common thing that healthy people do all the time, in a practical sense a person who only has a cough is functionally asymptomatic and able to go about their daily lives. It is only when they develop a fever that they become sick enough to notice.
https://www.theguardian.com/world/2020/feb/11/uk-man-linked-...
https://english.kyodonews.net/news/2020/02/255501851d48-half...
> At least one of every two instances of human-to-human transmission of the new coronavirus is believed to occur while the first patient is not yet showing symptoms, according to an estimate by a group of Japanese university researchers.
> Based on its determination, the team, headed by Hokkaido University professor Hiroshi Nishiura, has called for preventive measures as well as reinforcing the medical care system against a potential sharp rise in coronavirus patients, rather than focusing exclusively on isolation as a way to contain the disease.
https://www.google.com/search?q=S%26P&rlz=1C1GCEB_enUS862US8...
* delta, ie the slide itself,
* vega, ie the increased expectation of volatility for the remaining duration of the option contract,
* skew, which will increase more for index options than for single names due to implied correlation resetting higher.
I have noticed that the market seems to be in a "buy any dip" mentality, so be aware of that. If the market sells off, it may come right back the next day. Look at what happened already with the coronavirus outbreak, as well as Iran's missile launches before that.
Trading options is extremely risky and a lot of people teaching it, teach it because doing it is normally not profitable and they have already lost their money.
Unless you have some huge edge, which no one does, options are the last place to spend your time and blow your money.
It's something like:
1-50: nothing
51-70: a little
70-90: what you would get from a FAANG
90-99: millionaire
100: you're a billionaire
And then goes on to note that there is no 100 on a 99 sided die, seems like options are similar :) I have no belief in my ability to beat the market and treat them like a fun thing to spend some money on, not like an investment.
I was thinking deep out of the money gold calls...
Seriously, though; S&P puts yields are implicitly discounted by inflation — do we really think they won’t sacrifice the dollar on the alter of asset price nominal “stability”?
Gold calls get you a positive real yield on both stock market drop & inflationary response, no?
A worldwide pandemic would primarily exert its economic effect through supply shocks. The productive capacity of the economy genuinely shrinks. Stores can't open during a quarantine. Sick workers can't show up at the office.
A pandemic might have second-order demand shocks, particularly if panicking investors flee to quality. But there'd still be a genuine contraction in real and potential GDP, most of which would get absorbed by contracting corporate profits. Monetary stimulus can't route around those constraints.
I hope there is a dip as I want to put more in.
I don't think this Coronavirus thing will be the trigger though. Flu still far worse.
That would be the Housing Market.
However, the biggest impact may very well be the reaction in the public towards this and that in itself would cause more avenues of betting. Like facemask filters, only so many get made, so whatever companies make that will see a share price increase, if they are listed. Equally, the usual suspects in vaccines will be all hedged by the money market in trading from now until a winner (vaccine found) is made. Which will probably be around the time for winter 2020 flu vaccine from what I've read so far from best estimates.
That all said, if they said London would get 1" of snow, the amount of panic would be greater than what we are seeing so far.
But that may well change quickly, though at least we never had a flu riot that I'm aware of in history.
My understanding is that masks offer only minor protection against getting it, but help a lot against spreading it. They don’t stop a virus but they catch the snots.
Correct.
I am gonna open a site for giving free mask through crowdsourcing in many needed places.
AFAIK, the coronavirus test is not being conducted for people who have no history of visiting China or traveling outside, and the virus can be transmitted before symptoms could appear. Based on the article, it is conceivable that the virus could soon be found from a person who has no travel history outside US, but only when the person gets dangerously sick.
[1] https://www.medrxiv.org/content/10.1101/2020.02.04.20020495v...
Unless you have a fever and a cough they won't test you. According to the latest research out of China there are many people who when admitted to the hospital had no fever but tested positive.
Frankly a lot of cases are likely not being caught in the US and elsewhere.
https://en.m.wikipedia.org/wiki/Korsakoff_syndrome Korsakoff syndrome - Wikipedia
Can't say that about fire.
James Burke covered this in Connections² : https://www.youtube.com/watch?v=0yLa_IrAj-o
Also made me realize that originality and ownership of ideas is way more complicated than i'd thought.
Antimalarial compounds quinine, chloroquine and mefloquine affect the electrophysiological properties of Cys-loop receptors and have structural similarities to 5-HT3 receptor antagonists. So they might act at 5-HT3 receptors.
In 2006, the FDA banned sale of unapproved drugs containing quinine because of the risk of serious side effects or death.
I hear a lot of "it is just the flu." Maybe. The Spanish Flu was horrific, though. And when was the last time a city the size of london was quarantined for the flu?
I believe in data-driven fear. Care to go over the data?
I might need more measures if I was in the middle of Wuhan (or even just feeling ill, I guess) but frankly where I am it feels like any additional steps would be done out of fear, not reason.
> Since these compounds have been used in human patients with a safety track record and shown to be effective against various ailments, we suggest that they should be assessed in human patients suffering from the novel coronavirus disease.
ie. give it a try
I looked into doing a diy trial but some issues and the docs are on to it:
>A third drug, known as chloroquine, used to treat malaria, is being tested against coronavirus in China, the Times reported. https://nypost.com/2020/02/14/doctors-attempt-to-battle-coro... also 18 trials: http://www.chictr.org.cn/searchprojen.aspx?title=chloroquine...
So I guess I'll leave 'em to it and see how that works out.
Note that the mortality figures they're bandying about do intersect with the 1918 flu pandemic mortality rates at the high end.
It's not a well-defined phrase, I think this is the more likely interpretation.
(Even that article that you linked says, 'The definitions of both terms, "modern history" and "contemporary history", have changed over time, as more history has occurred, and so have their start dates.')
https://www.worldometers.info/coronavirus/coronavirus-cases/
? I guess the source data could be fudged but surely China realizes by now that faking things is only going to make them look worse in the long run? Maybe I'm too optimistic.
https://gisanddata.maps.arcgis.com/apps/opsdashboard/index.h...
https://www.taiwannews.com.tw/en/news/3874490
> In a notice issued by China's National Health Commission (NHC) on Feb. 6, it wrote that the classification of new Wuhan virus infections will be divided into four categories: "suspected cases," "clinically diagnosed cases," "confirmed cases," and "positive tests." Among these, "positive tests" refers to "asymptomatic infected patients" who test positive for the disease but have no symptoms.
> There is also a clear stipulation in the official document stating that "If the reported 'asymptomatic infected patient' has clinical manifestations, their status shall be revised to 'confirmed case' in a timely manner" (highlighted text in Tweet below). This indicates that even if a person tests positive for the disease but does not exhibit any symptoms, they will no longer be included in the daily infection reports.
(the notice cited: http://www.gov.cn/zhengce/zhengceku/2020-02/07/content_54758...)
Quoting the relevant section:
> GAZETTE: Is it significant that there are so few cases internationally compared with the number in China? Is that an indication that control measures are working or is it just gathering steam internationally?
> LIPSITCH: Unfortunately, I think it’s more likely to be that it’s gathering steam. We’ve released a preprint that we’ve been discussing publicly — and trying to get peer reviewed in the meantime — that looks at the numbers internationally, based on how many cases you would expect from normal travel volumes. And a couple of things are striking. One is that there are countries that really should be finding cases and haven’t yet, like Indonesia and maybe Cambodia. They are outside the range of uncertainty you would expect even given variability between countries. So our best guess is that there are undetected cases in those countries. Indonesia said a couple of days ago that it had done 50 tests, but it has a lot of air travel with Wuhan, let alone the rest of China. So 50 tests is not enough to be confident you’re catching all the cases. That’s one bit of evidence that to me was really striking. Second, I was reading The Wall Street Journal that Singapore had three cases so far that were not traced to any other case. Singapore is the opposite of Indonesia, in that they have more cases than you would expect based on their travel volume, probably because they’re better at detection. And even they are finding cases that they don’t have a source for. That makes me think that many other places do as well. Of course, we’re making guesses from limited information, but I think they’re pretty likely to be correct guesses, given the totality of information.
The temperature of a human body is 37ºC it's odd a virus would be incapacitated or slowed by "warmer" weather. I know to kill viruses a fever is what our bodies use along with the immune system. And I know this is referring to it outside a body but it seems odd. I would have expected warm, moist weather to make transmission easier like an incubator.
https://en.wikipedia.org/wiki/Flu_season
The causes section lists many potential explanations.
One theory is that water encapsulates the virus before it is breathed in, cutting aerosol transmission. [0]
[0]https://www.wunderground.com/cat6/flu-weather-its-not-cold-i...