The foundations of our knowledge are very quickly based on assumptions/beliefs.
Light is not really understood. It's a wave and a photon, depending on what we need to solve. We incorrectly say light is a "wave", but "wave" is a verb!! I remember thinking this sounded ridiculous when I was in school. You probably did too! We should all go back and redo our assumptions like you say.
The other thing that disappointed me was the explanation of why magnets attract/repel. (Do you remember your feeling about it? Did your innocent child mind reject the explanation?)