Especially if as the article says a failure of the AOA sensor on the system would be Hazardous (looks like it was Catastrophic when paired with MCAS in retrospect), that would have made the functional Design Assurance level for this system DAL B, which adds enough rigour not only in the software development process but so much before you even get to that in terms of Safety Assessments and ESPECIALLY change impact analyses when the function changes.
For sure there may have been pressure from management to keep MCAS out of the manual but it’s not really up to he regulatory agency to be experts on the aircraft design, if things are being hidden by the company then I’d consider this bordering on professional misconduct on the parts of the engineers overseeing this work.
I say this as a Professional Engineer working as an aerospace systems engineer.