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Is there actually something like that? A way to have issues inside the repo?

There is git-notes for embedding information to git objects https://git-scm.com/docs/git-notes

There is also a project (probably many) for managing patches and/or issues in a git repository, but I can't find any links to it right now (can't access my github stars...)

Edit: there is also a alternative to git that has much of the same functionality of github embedded in the SCM itself, Fossil. https://www.fossil-scm.org

Edit2: GitHub back, think the project I was thinking about above was https://github.com/MichaelMure/git-bug which describes itself as "Distributed bug tracker embedded in git"

BugsEverywhere (https://gitlab.com/bugseverywhere/bugseverywhere) does this, but the project isn't overly active these days.

The nice thing about BE compared to the more recent ones, is that it's VCS agnostic - it's just files in the repo, rather than e.g. using some special metadata feature of git/etc to track the issues.

I've yet to see a web UI for it tough (to expose it to non-technical users).

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