This was a few years ago, so things may have changed by now. But as they say, once bitten twice shy, and the wisdom of "just cron it" doesn't work with highly experimental tools like LE was for what I estimate to be the majority of its lifetime.
All it being new means is that depending on your risk ratio you need to decide whether updates to the software need testing or whether you need to invest in your own solution - or, how about just wait until it matures and keep the old process until then.
Waiting doesn't invalidate the premise either. It just means you lack the resources to implement it safely and that's ok.