The other way to look at the divide is protein vs nucleic acid. A lot of very interesting MAb and designer protein companies are in the bay area, but all the major CRISPR, mRNA, siRNA companies are in Boston. Sure you have Ionis and Caribou in CA, but that's really it.
If you believe the future is in the digital information nature of nucleic acid, Boston is the center of gravity by a huge margin.
That said, I would agree that Boston was right up at the top with the bay area in that respect. We always thought of it as Boston for depth, and the bay area for breadth.
The rest of the country was lagging way behind as I remember it, but this was a while ago. I mean there were a few bright spots. Places like Maryland-NOVA-DC area believe it or not, but they didn't shine like Boston and the bay area.